BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC006375

Symbol
Rpn7

Product
26S proteasome non-ATPase regulatory subunit 6-like Protein

NCBI Equivalent
662456

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	34 ± 1.6	1.1	75 ± 15	1.8
Brain	28 ± 1.6	0.9	36 ± 3.6	0.9
Anterior Midgut	79 ± 4.0	2.6	41 ± 2.4	1.0
Posterior Midgut	74 ± 9.1	2.5	40 ± 0.1	1.0
Hindgut	40 ± 4.8	1.3	47 ± 11	1.1
Tubules (Free)	46 ± 2.2	1.5	46 ± 1.7	1.1
Perirectal Tubules	29 ± 3.2	1.0
Rectum	28 ± 1.8	0.9
Rectal complex	41 ± 3.2	1.4	50 ± 5.2	1.2
Fat Body	34 ± 5.2	1.1	63 ± 26	1.5
Male Gonads	47 ± 4.6	1.6
Female Gonads	57 ± 6.7	1.9
Carcass	70 ± 34	2.3	60 ± 20	1.5

Whole Body	30 ± 3.3		41 ± 12

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006375-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006375	57 ± 2.3	58 ± 8.3	68 ± 10	49 ± 8.8

TC006375-RA	57 ± 2.3	58 ± 8.3	68 ± 10	49 ± 8.8