BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC006379

Symbol
LOC662588

Product
Sodium-dependent nutrient amino acid transporter 1-like Protein

iBeetle-Base
TC006379

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.8 ± 0.9	0.5	17 ± 13	1.6
Brain	0.0 ± 0.0	0.0	0.0 ± 0.0	0.0
Anterior Midgut	0.8 ± 0.8	0.1	1.0 ± 1.0	0.1
Posterior Midgut	59 ± 18	8.5	262 ± 148	26
Hindgut	0.9 ± 0.5	0.1	1.9 ± 1.0	0.2
Tubule	72 ± 3.5	10	37 ± 2.5	3.6
Perirectal Tubules	0.6 ± 0.6	0.1
Rectal complex	1.1 ± 0.6	0.2	6.8 ± 8.4	0.7
Rectum	0.9 ± 0.2	0.1
Fat Body	0.6 ± 0.2	0.1	0.1 ± 0.2	0.0
Male Gonads	4.4 ± 2.3	0.6
Female Gonads	0.6 ± 0.7	0.1
Carcass	1.0 ± 1.2	0.1	1.4 ± 0.5	0.1

Whole Body	7.0 ± 1.0		10 ± 3.6

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006379-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006379	0.1 ± 0.0	0.0 ± 0.0	0.0 ± 0.1	0.1 ± 0.0

TC006379-RA	0.1 ± 0.0	0.0 ± 0.0	0.0 ± 0.1	0.1 ± 0.0