BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC006391

Symbol
Tcas_11340

Product
cys-loop ligand-gated ion channel subunit

iBeetle-Base
TC006391

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.7 ± 1.8	0.2	0.3 ± 0.1	0.0
Brain	0.0 ± 0.0	0.0	0.8 ± 0.6	0.0
Anterior Midgut	413 ± 60	30	541 ± 224	25
Posterior Midgut	144 ± 34	10	122 ± 50	5.7
Hindgut	1575 ± 1077	114	1806 ± 1186	84
Tubule	0.1 ± 0.0	0.0	0.1 ± 0.0	0.0
Perirectal Tubules	3.3 ± 3.8	0.2
Rectal complex	0.5 ± 0.2	0.0	1.1 ± 0.5	0.1
Rectum	3.0 ± 1.5	0.2
Fat Body	1.1 ± 0.2	0.1	0.1 ± 0.1	0.0
Male Gonads	0.5 ± 0.0	0.0
Female Gonads	0.1 ± 0.1	0.0
Carcass	0.8 ± 0.7	0.1	0.7 ± 0.9	0.0

Whole Body	14 ± 0.7		21 ± 3.4

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006391-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006391	0.7 ± 0.0	0.8 ± 0.3	0.1 ± 0.0	0.1 ± 0.0

TC006391-RA	0.7 ± 0.0	0.8 ± 0.3	0.1 ± 0.0	0.1 ± 0.0