BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC006492

Symbol
Rpt1

Product
26S protease regulatory subunit 8-like Protein

NCBI Equivalent
661114

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	26 ± 0.8	0.9	87 ± 15	1.9
Brain	35 ± 3.6	1.2	30 ± 3.9	0.7
Anterior Midgut	158 ± 33	5.2	106 ± 22	2.3
Posterior Midgut	144 ± 17	4.7	82 ± 17	1.8
Hindgut	48 ± 13	1.6	48 ± 28	1.1
Tubules (Free)	27 ± 0.4	0.9	28 ± 2.0	0.6
Perirectal Tubules	25 ± 3.4	0.8
Rectum	26 ± 1.1	0.9
Rectal complex	34 ± 3.8	1.1	44 ± 3.7	1.0
Fat Body	77 ± 8.1	2.5	53 ± 6.3	1.2
Male Gonads	136 ± 18	4.5
Female Gonads	83 ± 3.6	2.7
Carcass	86 ± 29	2.8	94 ± 55	2.1

Whole Body	30 ± 0.9		45 ± 3.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006492-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006492	40 ± 3.5	50 ± 8.8	61 ± 11	47 ± 5.4

TC006492-RA	40 ± 3.5	50 ± 8.8	61 ± 11	47 ± 5.4