BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC006530

Symbol
LOC655824

Product
Pyruvate kinase-like Protein

NCBI Equivalent
655824

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	42 ± 2.2	0.8	0.8 ± 0.3	0.0
Brain	2.0 ± 0.4	0.0	0.6 ± 0.3	0.0
Anterior Midgut	144 ± 39	2.8	97 ± 7.3	1.9
Posterior Midgut	44 ± 7.6	0.9	41 ± 6.8	0.8
Hindgut	189 ± 89	3.7	270 ± 74	5.4
Tubules (Free)	50 ± 1.0	1.0	52 ± 1.6	1.1
Perirectal Tubules	15 ± 5.2	0.3
Rectum	33 ± 4.3	0.6
Rectal complex	15 ± 0.9	0.3	14 ± 2.2	0.3
Fat Body	56 ± 13	1.1	721 ± 572	15
Male Gonads	5.3 ± 1.2	0.1
Female Gonads	2.9 ± 0.1	0.1
Carcass	112 ± 12	2.2	59 ± 50	1.2

Whole Body	52 ± 12		50 ± 14

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006530-RA
TC006530-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006530	10 ± 1.4	5.5 ± 0.2	2.7 ± 0.8	2.1 ± 0.5

TC006530-RA	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.1	0.1 ± 0.0
TC006530-RB	10 ± 1.4	5.4 ± 0.2	2.6 ± 0.7	2.1 ± 0.4