BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC006605

Symbol
mRpS7

Product
28S ribosomal protein S7, mitochondrial-like Protein

NCBI Equivalent
662948

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	8.6 ± 0.2	0.6	17 ± 6.3	1.2
Brain	26 ± 4.3	1.7	17 ± 2.3	1.2
Anterior Midgut	152 ± 21	10	67 ± 28	4.6
Posterior Midgut	120 ± 10	7.9	63 ± 27	4.3
Hindgut	41 ± 15	2.7	33 ± 26	2.3
Tubules (Free)	19 ± 1.1	1.3	17 ± 0.8	1.2
Perirectal Tubules	11 ± 1.1	0.7
Rectum	7.0 ± 0.3	0.5
Rectal complex	12 ± 1.4	0.8	13 ± 1.7	0.9
Fat Body	83 ± 14	5.5	86 ± 41	5.9
Male Gonads	180 ± 18	12
Female Gonads	128 ± 25	8.5
Carcass	33 ± 5.6	2.2	51 ± 17	3.5

Whole Body	15 ± 1.7		14 ± 5.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006605-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006605	115 ± 7.6	66 ± 7.7	76 ± 12	67 ± 9.7

TC006605-RA	115 ± 7.6	66 ± 7.7	76 ± 12	67 ± 9.7