BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC006642
NCBI Equivalent
 not available
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head4.5 ± 0.62.31.8 ± 0.7n.a.
Brain28 ± 0.31414 ± 2.16.8
Anterior Midgut1.2 ± 0.6n.a.3.1 ± 0.71.6
Posterior Midgut1.4 ± 0.5n.a.2.1 ± 0.81.1
Hindgut6.5 ± 0.63.24.8 ± 1.22.4
Tubules (Free)0.4 ± 0.1n.a.0.3 ± 0.1n.a.
Perirectal Tubules1.0 ± 1.4n.a.  
Rectum4.7 ± 1.02.4  
Rectal complex9.5 ± 0.24.72.5 ± 0.31.3
Fat Body0.3 ± 0.1n.a.0.5 ± 0.7n.a.
Male Gonads0.9 ± 0.3n.a.  
Female Gonads0.1 ± 0.1n.a.  
Carcass0.6 ± 0.1n.a.1.7 ± 0.4n.a.
Whole Body0.7 ± 0.11.8 ± 1.9
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC006642-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0066420.1 ± 0.10.2 ± 0.11.2 ± 0.14.0 ± 0.9
TC006642-RA0.1 ± 0.10.2 ± 0.11.2 ± 0.14.0 ± 0.9
0–1 h1–24 h24–36 h36–72 h0246810FPKM