BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC006736

Symbol
wmd

Product
Eukaryotic translation initiation factor 3 subunit I-like Protein

NCBI Equivalent
658063

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	20 ± 1.7	0.5	121 ± 80	4.7
Brain	32 ± 0.3	0.9	26 ± 5.5	1.0
Anterior Midgut	18 ± 1.5	0.5	11 ± 3.1	0.4
Posterior Midgut	19 ± 1.6	0.5	12 ± 1.8	0.5
Hindgut	16 ± 1.7	0.4	25 ± 3.4	1.0
Tubules (Free)	23 ± 2.0	0.6	20 ± 5.0	0.8
Perirectal Tubules	82 ± 20	2.2
Rectum	24 ± 1.6	0.7
Rectal complex	50 ± 4.2	1.4	57 ± 9.8	2.2
Fat Body	66 ± 8.3	1.8	17 ± 6.3	0.7
Male Gonads	96 ± 18	2.6
Female Gonads	25 ± 1.3	0.7
Carcass	27 ± 5.7	0.7	22 ± 2.6	0.8

Whole Body	37 ± 4.3		26 ± 6.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006736-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006736	47 ± 11	42 ± 3.1	51 ± 11	46 ± 5.2

TC006736-RA	47 ± 11	42 ± 3.1	51 ± 11	46 ± 5.2