BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC006775
Symbol
 Caf1-55
Product
 Probable histone-binding protein Caf1-like Protein
NCBI Equivalent
662277
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head11 ± 0.60.923 ± 0.31.7
Brain50 ± 1.54.266 ± 144.8
Anterior Midgut72 ± 2.06.052 ± 1.53.8
Posterior Midgut77 ± 6.46.542 ± 2.93.1
Hindgut14 ± 7.81.223 ± 2.81.7
Tubules (Free)6.3 ± 0.30.59.3 ± 0.90.7
Perirectal Tubules14 ± 1.11.2  
Rectum15 ± 1.11.2  
Rectal complex10 ± 0.30.916 ± 0.71.1
Fat Body16 ± 0.71.312 ± 3.60.9
Male Gonads19 ± 2.61.6  
Female Gonads163 ± 1914  
Carcass11 ± 0.90.914 ± 6.11.0
Whole Body12 ± 1.914 ± 0.8
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC006775-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC006775115 ± 8.6240 ± 65281 ± 7490 ± 16
TC006775-RA115 ± 8.6240 ± 65281 ± 7490 ± 16
0–1 h1–24 h24–36 h36–72 h050100150200250300350400FPKM