BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC006978

Symbol
tfc

Product
Brevican core protein-like Protein

iBeetle-Base
TC006978

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	1.1 ± 0.3	n.a.	76 ± 29	1.5
Brain	0.0 ± 0.0	n.a.	0.2 ± 0.2	0.0
Anterior Midgut	0.0 ± 0.0	n.a.	0.1 ± 0.1	0.0
Posterior Midgut	0.0 ± 0.0	n.a.	0.1 ± 0.1	0.0
Hindgut	0.3 ± 0.2	n.a.	1.7 ± 0.2	0.0
Tubule	2.7 ± 0.9	1.3	1.0 ± 0.2	0.0
Perirectal Tubules	0.4 ± 0.3	n.a.
Rectal complex	0.4 ± 0.0	n.a.	4.0 ± 3.2	0.1
Rectum	2.0 ± 0.7	1.0
Fat Body	0.5 ± 0.3	n.a.	1.4 ± 0.7	0.0
Male Gonads	0.3 ± 0.2	n.a.
Female Gonads	0.2 ± 0.1	n.a.
Carcass	0.3 ± 0.1	n.a.	337 ± 154	6.8

Whole Body	0.4 ± 0.1		50 ± 45

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC006978-RA
TC006978-RB
TC006978-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC006978	0.5 ± 0.1	31 ± 1.3	29 ± 3.7	35 ± 5.2

TC006978-RA	0.0 ± 0.0	1.6 ± 0.3	0.8 ± 0.1	1.2 ± 0.4
TC006978-RB	0.3 ± 0.1	21 ± 1.6	19 ± 3.1	24 ± 3.2
TC006978-RC	0.1 ± 0.1	8.1 ± 0.9	9.9 ± 1.5	10 ± 2.0