BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC007012
Symbol
 Vps39
Product
 Vam6/Vps39-like protein
NCBI Equivalent
656512
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head10 ± 0.91.66.0 ± 0.90.8
Brain12 ± 0.71.811 ± 0.61.5
Anterior Midgut6.2 ± 0.61.07.6 ± 0.91.0
Posterior Midgut5.8 ± 0.60.98.3 ± 0.51.1
Hindgut10 ± 2.31.611 ± 1.01.4
Tubules (Free)11 ± 1.11.711 ± 0.91.4
Perirectal Tubules10 ± 0.41.6  
Rectum11 ± 0.61.7  
Rectal complex8.2 ± 0.21.38.7 ± 0.81.2
Fat Body6.7 ± 0.61.010 ± 1.01.3
Male Gonads6.7 ± 1.11.0  
Female Gonads8.2 ± 1.21.3  
Carcass7.8 ± 0.61.28.3 ± 0.71.1
Whole Body6.5 ± 0.77.6 ± 1.6
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC007012-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0070129.3 ± 0.35.8 ± 0.55.9 ± 0.18.5 ± 0.2
TC007012-RA9.3 ± 0.35.8 ± 0.55.9 ± 0.18.5 ± 0.2
0–1 h1–24 h24–36 h36–72 h0246810FPKM