BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC007083

Symbol
LOC658789

iBeetle-Base
TC007083

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.9 ± 0.1	1.5	8.2 ± 1.8	1.7
Brain	0.4 ± 0.1	n.a.	1.2 ± 0.1	0.2
Anterior Midgut	0.5 ± 0.2	n.a.	1.3 ± 0.3	0.3
Posterior Midgut	0.5 ± 0.2	n.a.	1.3 ± 0.7	0.3
Hindgut	4.0 ± 1.4	2.0	3.6 ± 0.3	0.8
Tubule	4.8 ± 1.2	2.4	1.1 ± 0.3	0.2
Perirectal Tubules	6.8 ± 0.6	3.4
Rectal complex	4.0 ± 0.2	2.0	6.1 ± 0.2	1.3
Rectum	1.8 ± 0.2	n.a.
Fat Body	8.1 ± 3.1	4.0	3.1 ± 0.9	0.7
Male Gonads	1.8 ± 0.3	n.a.
Female Gonads	0.3 ± 0.1	n.a.
Carcass	7.4 ± 1.1	3.7	7.2 ± 1.6	1.5

Whole Body	1.8 ± 0.5		4.8 ± 1.9

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007083-RA
TC007083-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007083	0.7 ± 0.0	5.3 ± 0.3	5.3 ± 0.2	9.4 ± 1.0

TC007083-RA	0.6 ± 0.0	5.0 ± 0.2	4.7 ± 0.5	7.8 ± 0.7
TC007083-RB	0.1 ± 0.0	0.3 ± 0.2	0.7 ± 0.2	1.7 ± 0.3