BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC007096
Symbol
 LOC655438
Product
 Probable 4-coumarate--CoA ligase 3-like Protein
NCBI Equivalent
655438
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head2.2 ± 0.40.81.6 ± 0.3n.a.
Brain1.7 ± 0.00.61.7 ± 0.4n.a.
Anterior Midgut0.9 ± 0.20.31.5 ± 0.1n.a.
Posterior Midgut1.1 ± 0.10.42.1 ± 0.31.1
Hindgut3.5 ± 0.91.32.7 ± 0.11.3
Tubules (Free)1.9 ± 0.50.71.3 ± 0.2n.a.
Perirectal Tubules4.5 ± 1.21.6  
Rectum4.0 ± 0.11.5  
Rectal complex3.6 ± 0.21.32.2 ± 0.41.1
Fat Body2.4 ± 0.20.92.4 ± 1.31.2
Male Gonads2.9 ± 0.51.0  
Female Gonads0.5 ± 0.20.2  
Carcass2.1 ± 0.10.82.8 ± 0.61.4
Whole Body2.8 ± 0.51.8 ± 1.0
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC007096-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0070960.1 ± 0.00.3 ± 0.00.4 ± 0.10.4 ± 0.1
TC007096-RA0.1 ± 0.00.3 ± 0.00.4 ± 0.10.4 ± 0.1
0–1 h1–24 h24–36 h36–72 h0246810FPKM