BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007136

Symbol
LOC663031

Product
Muscle LIM protein Mlp84B-like Protein

NCBI Equivalent
663031

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2245 ± 140	5.6	7454 ± 734	2.4
Brain	8.8 ± 4.5	0.0	164 ± 83	0.1
Anterior Midgut	292 ± 101	0.7	288 ± 67	0.1
Posterior Midgut	582 ± 230	1.5	328 ± 41	0.1
Hindgut	2542 ± 1051	6.4	3846 ± 1410	1.2
Tubules (Free)	98 ± 3.5	0.2	51 ± 7.8	0.0
Perirectal Tubules	560 ± 392	1.4
Rectum	1764 ± 132	4.4
Rectal complex	1460 ± 179	3.7	1001 ± 62	0.3
Fat Body	67 ± 18	0.2	8.6 ± 1.0	0.0
Male Gonads	139 ± 22	0.3
Female Gonads	42 ± 41	0.1
Carcass	23411 ± 2696	59	99140 ± 7593	32

Whole Body	399 ± 10		3086 ± 3229

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007136-RA
TC007136-RB
TC007136-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007136	8.0 ± 9.7	14 ± 11	21 ± 1.6	4837 ± 1160

TC007136-RA	7.8 ± 9.5	14 ± 10	21 ± 1.6	4812 ± 1158
TC007136-RB	0.0 ± 0.1	0.2 ± 0.1	0.2 ± 0.0	24 ± 3.4
TC007136-RC	0.1 ± 0.2	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0