BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007152

Symbol
LOC663418

Product
Transforming growth factor beta regulator 1-like Protein

NCBI Equivalent
663418

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.9 ± 0.2	0.2	4.6 ± 0.5	1.5
Brain	6.8 ± 1.2	0.3	8.2 ± 0.9	2.6
Anterior Midgut	5.2 ± 1.0	0.2	5.8 ± 1.5	1.9
Posterior Midgut	5.2 ± 0.6	0.2	6.2 ± 1.1	2.0
Hindgut	5.3 ± 1.8	0.2	3.8 ± 0.2	1.2
Tubules (Free)	3.0 ± 0.7	0.1	2.5 ± 0.2	0.8
Perirectal Tubules	2.3 ± 0.9	0.1
Rectum	2.7 ± 0.6	0.1
Rectal complex	3.7 ± 0.3	0.2	3.6 ± 0.5	1.2
Fat Body	25 ± 15	1.2	4.1 ± 1.6	1.3
Male Gonads	69 ± 4.2	3.1
Female Gonads	17 ± 2.0	0.8
Carcass	4.4 ± 1.6	0.2	4.5 ± 1.1	1.5

Whole Body	22 ± 4.5		3.1 ± 0.4

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007152-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007152	28 ± 1.4	21 ± 0.9	20 ± 3.0	14 ± 2.9

TC007152-RA	28 ± 1.4	21 ± 0.9	20 ± 3.0	14 ± 2.9