BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007170

Symbol
CAPAr

Product
Neuropeptides capa receptor-like Protein

NCBI Equivalent
662766

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	2.1 ± 0.3	0.9	1.0 ± 0.4	0.3
Brain	6.1 ± 0.7	2.7	4.3 ± 0.6	1.2
Anterior Midgut	0.0 ± 0.0	0.0	0.2 ± 0.0	0.0
Posterior Midgut	0.2 ± 0.1	0.1	0.4 ± 0.3	0.1
Hindgut	0.6 ± 0.6	0.3	0.2 ± 0.1	0.1
Tubules (Free)	132 ± 0.3	59	96 ± 9.1	27
Perirectal Tubules	0.3 ± 0.1	0.1
Rectum	0.1 ± 0.1	0.1
Rectal complex	0.2 ± 0.0	0.1	0.3 ± 0.1	0.1
Fat Body	0.2 ± 0.1	0.1	0.9 ± 0.4	0.2
Male Gonads	0.1 ± 0.1	0.0
Female Gonads	0.1 ± 0.0	0.0
Carcass	0.1 ± 0.2	0.1	0.3 ± 0.2	0.1

Whole Body	2.3 ± 0.4		3.5 ± 2.0

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007170-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007170	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.1	0.3 ± 0.1

TC007170-RA	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.1	0.3 ± 0.1