BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007247

Symbol
LOC664559

Product
croquemort

NCBI Equivalent
664559

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	29 ± 1.7	1.3	17 ± 2.8	0.4
Brain	9.2 ± 0.1	0.4	11 ± 1.1	0.3
Anterior Midgut	47 ± 2.6	2.2	107 ± 11	2.7
Posterior Midgut	42 ± 0.8	1.9	58 ± 10	1.4
Hindgut	25 ± 5.8	1.2	35 ± 3.4	0.9
Tubules (Free)	45 ± 9.4	2.1	49 ± 7.6	1.2
Perirectal Tubules	30 ± 2.3	1.4
Rectum	35 ± 5.1	1.6
Rectal complex	34 ± 3.6	1.6	36 ± 3.8	0.9
Fat Body	56 ± 13	2.6	114 ± 69	2.8
Male Gonads	34 ± 7.4	1.5
Female Gonads	37 ± 12	1.7
Carcass	103 ± 67	4.8	31 ± 11	0.8

Whole Body	22 ± 1.8		40 ± 15

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007247-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007247	8.5 ± 1.2	11 ± 0.7	4.6 ± 0.7	4.6 ± 0.9

TC007247-RA	8.5 ± 1.2	11 ± 0.7	4.6 ± 0.7	4.6 ± 0.9