BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007336

Symbol
CoRest

Product
REST corepressor-like Protein

NCBI Equivalent
664423

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.5 ± 0.7	0.7	8.4 ± 1.7	1.0
Brain	42 ± 2.9	4.1	27 ± 2.6	3.2
Anterior Midgut	13 ± 0.6	1.2	19 ± 2.1	2.2
Posterior Midgut	16 ± 1.8	1.5	17 ± 4.1	2.0
Hindgut	20 ± 4.4	1.9	15 ± 2.2	1.8
Tubules (Free)	9.5 ± 1.2	0.9	11 ± 1.2	1.3
Perirectal Tubules	9.9 ± 1.8	0.9
Rectum	11 ± 0.3	1.1
Rectal complex	6.1 ± 0.7	0.6	7.3 ± 0.5	0.9
Fat Body	16 ± 2.7	1.5	9.0 ± 3.8	1.1
Male Gonads	24 ± 0.9	2.3
Female Gonads	47 ± 20	4.5
Carcass	10 ± 2.1	1.0	15 ± 3.8	1.8

Whole Body	10 ± 0.5		8.5 ± 1.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007336-RA
TC007336-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007336	27 ± 2.8	24 ± 2.2	20 ± 1.2	13 ± 1.2

TC007336-RA	25 ± 2.6	22 ± 2.0	18 ± 1.5	11 ± 1.0
TC007336-RB	2.2 ± 0.2	2.5 ± 0.2	2.1 ± 0.5	1.6 ± 0.3