BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC007344

Symbol
Top3beta

Product
DNA topoisomerase 3-beta-like Protein

iBeetle-Base
TC007344

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.9 ± 0.1	1.2	4.9 ± 0.2	1.4
Brain	6.2 ± 0.2	1.9	5.4 ± 0.3	1.6
Anterior Midgut	3.3 ± 0.2	1.0	3.8 ± 0.1	1.1
Posterior Midgut	3.1 ± 0.3	0.9	4.7 ± 0.5	1.4
Hindgut	3.6 ± 0.5	1.1	5.1 ± 1.0	1.5
Tubule	4.8 ± 0.3	1.4	4.7 ± 0.3	1.4
Perirectal Tubules	3.5 ± 0.4	1.0
Rectal complex	3.9 ± 0.0	1.2	3.9 ± 0.3	1.2
Rectum	3.8 ± 0.3	1.1
Fat Body	4.4 ± 0.6	1.3	3.3 ± 0.9	1.0
Male Gonads	4.5 ± 1.0	1.4
Female Gonads	4.0 ± 0.3	1.2
Carcass	3.3 ± 0.9	1.0	4.4 ± 1.8	1.3

Whole Body	3.3 ± 0.3		3.4 ± 0.4

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007344-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007344	2.6 ± 0.6	1.4 ± 0.1	1.7 ± 0.2	1.9 ± 0.6

TC007344-RA	2.6 ± 0.6	1.4 ± 0.1	1.7 ± 0.2	1.9 ± 0.6