BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC007396
Symbol
 nSMase
Product
 Putative neutral sphingomyelinase-like Protein
NCBI Equivalent
663944
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head9.8 ± 0.21.016 ± 0.91.5
Brain6.2 ± 0.00.68.8 ± 0.20.8
Anterior Midgut20 ± 1.22.119 ± 2.41.8
Posterior Midgut21 ± 2.82.123 ± 2.02.1
Hindgut9.5 ± 2.11.011 ± 0.61.0
Tubules (Free)21 ± 2.32.221 ± 0.11.9
Perirectal Tubules15 ± 0.81.5  
Rectum10.0 ± 1.81.0  
Rectal complex12 ± 1.11.212 ± 0.71.1
Fat Body7.3 ± 1.40.810.0 ± 1.70.9
Male Gonads13 ± 0.31.4  
Female Gonads9.8 ± 1.11.0  
Carcass14 ± 4.21.411 ± 2.61.0
Whole Body9.6 ± 0.511 ± 1.8
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC007396-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0073969.0 ± 0.76.9 ± 0.84.6 ± 0.34.7 ± 1.1
TC007396-RA9.0 ± 0.76.9 ± 0.84.6 ± 0.34.7 ± 1.1
0–1 h1–24 h24–36 h36–72 h0246810FPKM