BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC007406

Symbol
RpL9

Product
60S ribosomal protein L9-like Protein

iBeetle-Base
TC007406

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	325 ± 14	1.0	889 ± 220	1.5
Brain	58 ± 6.9	0.2	167 ± 27	0.3
Anterior Midgut	3064 ± 156	9.2	1198 ± 103	2.0
Posterior Midgut	4097 ± 777	12	1246 ± 248	2.1
Hindgut	306 ± 60	0.9	238 ± 45	0.4
Tubule	719 ± 39	2.2	497 ± 15	0.8
Perirectal Tubules	328 ± 38	1.0
Rectal complex	322 ± 27	1.0	378 ± 38	0.6
Rectum	395 ± 21	1.2
Fat Body	366 ± 21	1.1	1173 ± 835	1.9
Male Gonads	644 ± 200	1.9
Female Gonads	915 ± 142	2.7
Carcass	410 ± 75	1.2	969 ± 615	1.6

Whole Body	333 ± 21		604 ± 143

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007406-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007406	898 ± 120	1816 ± 484	1592 ± 530	762 ± 137

TC007406-RA	898 ± 120	1816 ± 484	1592 ± 530	762 ± 137