BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007491

Symbol
tko

Product
40S ribosomal protein S12, mitochondrial-like Protein

NCBI Equivalent
657180

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	15 ± 1.7	0.7	32 ± 7.5	1.3
Brain	10 ± 0.4	0.4	12 ± 1.8	0.5
Anterior Midgut	64 ± 0.9	2.8	28 ± 4.5	1.1
Posterior Midgut	57 ± 5.0	2.4	22 ± 0.6	0.9
Hindgut	24 ± 6.0	1.0	14 ± 3.4	0.6
Tubules (Free)	22 ± 1.0	1.0	22 ± 0.9	0.9
Perirectal Tubules	22 ± 4.3	0.9
Rectum	13 ± 1.3	0.5
Rectal complex	18 ± 2.4	0.8	21 ± 3.6	0.8
Fat Body	29 ± 7.0	1.2	64 ± 32	2.6
Male Gonads	49 ± 6.2	2.1
Female Gonads	35 ± 3.3	1.5
Carcass	31 ± 2.2	1.3	33 ± 4.1	1.3

Whole Body	23 ± 3.9		24 ± 11

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007491-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007491	196 ± 35	156 ± 21	113 ± 16	90 ± 17

TC007491-RA	196 ± 35	156 ± 21	113 ± 16	90 ± 17