BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC007560
NCBI Equivalent
 not available
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head7.0 ± 0.50.89.3 ± 1.21.0
Brain10 ± 0.21.19.2 ± 0.31.0
Anterior Midgut31 ± 2.23.511 ± 3.61.3
Posterior Midgut28 ± 1.63.19.3 ± 1.31.1
Hindgut5.3 ± 1.10.64.3 ± 0.40.5
Tubules (Free)9.3 ± 0.31.012 ± 2.61.3
Perirectal Tubules8.4 ± 2.10.9  
Rectum6.0 ± 0.20.7  
Rectal complex7.8 ± 0.30.911 ± 1.61.2
Fat Body9.6 ± 0.91.114 ± 4.61.6
Male Gonads14 ± 0.91.5  
Female Gonads7.2 ± 0.40.8  
Carcass10 ± 1.71.115 ± 2.61.7
Whole Body9.0 ± 0.88.8 ± 2.0
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC007560-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00756014 ± 0.84.9 ± 0.65.2 ± 0.46.2 ± 1.0
TC007560-RA14 ± 0.84.9 ± 0.65.2 ± 0.46.2 ± 1.0
0–1 h1–24 h24–36 h36–72 h05101520FPKM