BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007598

Symbol
LOC103312596

Product
Helix-loop-helix protein delilah-like Protein

NCBI Equivalent
103312596

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	4.1 ± 0.5	2.0	23 ± 5.1	5.2
Brain	0.0 ± 0.0	n.a.	0.1 ± 0.1	0.0
Anterior Midgut	0.1 ± 0.0	n.a.	0.0 ± 0.0	0.0
Posterior Midgut	0.1 ± 0.1	n.a.	0.2 ± 0.1	0.0
Hindgut	1.2 ± 0.1	n.a.	1.6 ± 0.7	0.4
Tubules (Free)	0.0 ± 0.0	n.a.	0.0 ± 0.0	0.0
Perirectal Tubules	4.4 ± 7.5	2.2
Rectum	34 ± 1.2	17
Rectal complex	10 ± 1.6	5.2	6.3 ± 0.8	1.4
Fat Body	0.3 ± 0.1	n.a.	0.1 ± 0.2	0.0
Male Gonads	0.3 ± 0.1	n.a.
Female Gonads	0.1 ± 0.0	n.a.
Carcass	8.5 ± 1.1	4.3	13 ± 12	2.8

Whole Body	0.8 ± 0.1		4.5 ± 2.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007598-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007598	0.6 ± 0.1	4.8 ± 0.4	12 ± 1.4	50 ± 8.4

TC007598-RA	0.6 ± 0.1	4.8 ± 0.4	12 ± 1.4	50 ± 8.4