BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007648

Symbol
LOC656593

Product
RNA-binding protein 42-like Protein

NCBI Equivalent
656593

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	16 ± 1.0	1.1	20 ± 0.7	1.2
Brain	22 ± 0.1	1.6	18 ± 1.7	1.0
Anterior Midgut	16 ± 0.7	1.1	19 ± 0.7	1.1
Posterior Midgut	15 ± 1.3	1.1	20 ± 1.3	1.1
Hindgut	11 ± 1.2	0.7	14 ± 1.7	0.8
Tubules (Free)	14 ± 0.7	1.0	13 ± 1.3	0.8
Perirectal Tubules	14 ± 1.6	1.0
Rectum	14 ± 2.0	1.0
Rectal complex	16 ± 3.2	1.1	15 ± 0.6	0.9
Fat Body	25 ± 3.7	1.7	16 ± 6.1	0.9
Male Gonads	15 ± 1.6	1.0
Female Gonads	9.6 ± 0.9	0.7
Carcass	16 ± 1.1	1.1	11 ± 3.9	0.7

Whole Body	14 ± 1.1		17 ± 4.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007648-RA
TC007648-RB
TC007648-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007648	38 ± 3.2	52 ± 3.7	71 ± 8.0	64 ± 11

TC007648-RA	17 ± 1.4	28 ± 3.3	46 ± 7.1	38 ± 4.8
TC007648-RB	11 ± 0.4	11 ± 0.6	12 ± 1.6	11 ± 3.4
TC007648-RC	9.0 ± 1.6	13 ± 0.2	13 ± 1.1	15 ± 3.9