BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007700

Symbol
mlt

Product
Tubulin-specific chaperone cofactor E-like protein

NCBI Equivalent
662329

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	35 ± 1.0	0.2	59 ± 17	1.2
Brain	22 ± 0.4	0.1	20 ± 3.1	0.4
Anterior Midgut	33 ± 4.6	0.2	65 ± 18	1.4
Posterior Midgut	39 ± 15	0.2	73 ± 22	1.5
Hindgut	226 ± 141	1.3	310 ± 180	6.5
Tubules (Free)	101 ± 2.2	0.6	114 ± 19	2.4
Perirectal Tubules	32 ± 3.3	0.2
Rectum	47 ± 1.8	0.3
Rectal complex	34 ± 1.3	0.2	45 ± 8.2	0.9
Fat Body	806 ± 328	4.6	135 ± 125	2.8
Male Gonads	2162 ± 198	12
Female Gonads	18 ± 9.2	0.1
Carcass	136 ± 52	0.8	273 ± 103	5.8

Whole Body	175 ± 37		47 ± 13

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007700-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007700	1.1 ± 0.1	5.0 ± 0.9	13 ± 2.1	6.9 ± 0.7

TC007700-RA	1.1 ± 0.1	5.0 ± 0.9	13 ± 2.1	6.9 ± 0.7