BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007784

NCBI Equivalent
not available

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.4 ± 1.8	0.2	1.3 ± 0.5	0.1
Brain	0.1 ± 0.0	0.0	0.1 ± 0.1	0.0
Anterior Midgut	199 ± 29	14	186 ± 26	19
Posterior Midgut	81 ± 1.1	5.9	101 ± 22	11
Hindgut	0.2 ± 0.1	0.0	0.2 ± 0.1	0.0
Tubules (Free)	0.6 ± 0.1	0.0	0.1 ± 0.0	0.0
Perirectal Tubules	0.1 ± 0.1	0.0
Rectum	0.1 ± 0.0	0.0
Rectal complex	0.2 ± 0.2	0.0	0.3 ± 0.4	0.0
Fat Body	1.4 ± 0.6	0.1	0.2 ± 0.1	0.0
Male Gonads	0.5 ± 0.3	0.0
Female Gonads	0.3 ± 0.1	0.0
Carcass	2.2 ± 0.9	0.2	3.9 ± 1.1	0.4

Whole Body	14 ± 3.0		9.6 ± 2.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007784-RA
TC007784-RB
TC007784-RC

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007784	0.2 ± 0.0	0.2 ± 0.0	0.1 ± 0.0	0.2 ± 0.0

TC007784-RA	0.1 ± 0.1	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0
TC007784-RB	0.1 ± 0.1	0.1 ± 0.0	0.0 ± 0.0	0.1 ± 0.0
TC007784-RC	0.1 ± 0.0	0.1 ± 0.0	0.1 ± 0.1	0.1 ± 0.0