BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007806

Symbol
LOC100141870

NCBI Equivalent
100141870

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	0.7 ± 0.1	n.a.	52 ± 24	5.9
Brain	0.2 ± 0.0	n.a.	0.5 ± 0.3	0.1
Anterior Midgut	0.1 ± 0.0	n.a.	0.1 ± 0.0	0.0
Posterior Midgut	0.0 ± 0.0	n.a.	0.1 ± 0.1	0.0
Hindgut	0.7 ± 0.2	n.a.	3.6 ± 0.4	0.4
Tubules (Free)	0.7 ± 0.2	n.a.	0.9 ± 0.6	0.1
Perirectal Tubules	7.5 ± 0.9	3.7
Rectum	2.1 ± 0.3	1.0
Rectal complex	4.2 ± 0.2	2.1	20 ± 11	2.2
Fat Body	0.2 ± 0.1	n.a.	0.6 ± 0.2	0.1
Male Gonads	0.2 ± 0.0	n.a.
Female Gonads	0.1 ± 0.0	n.a.
Carcass	0.2 ± 0.1	n.a.	3.4 ± 2.8	0.4

Whole Body	0.7 ± 0.2		8.9 ± 8.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007806-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007806	0.3 ± 0.1	2.2 ± 0.2	1.2 ± 0.2	18 ± 3.5

TC007806-RA	0.3 ± 0.1	2.2 ± 0.2	1.2 ± 0.2	18 ± 3.5