BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007854

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.1 ± 0.4	0.8	2.9 ± 0.8	0.8
Brain	2.1 ± 0.0	0.5	1.3 ± 0.1	0.3
Anterior Midgut	13 ± 2.3	3.2	4.5 ± 0.9	1.2
Posterior Midgut	8.7 ± 1.4	2.2	3.7 ± 0.2	1.0
Hindgut	4.1 ± 0.7	1.0	4.6 ± 1.0	1.2
Tubules (Free)	6.0 ± 0.7	1.5	8.1 ± 0.3	2.1
Perirectal Tubules	5.3 ± 0.7	1.3
Rectum	5.0 ± 0.7	1.3
Rectal complex	3.2 ± 0.2	0.8	4.7 ± 0.4	1.3
Fat Body	3.2 ± 0.1	0.8	4.6 ± 1.8	1.2
Male Gonads	4.1 ± 0.8	1.0
Female Gonads	11 ± 1.0	2.8
Carcass	2.9 ± 0.2	0.7	1.9 ± 0.5	0.5

Whole Body	4.0 ± 0.7		3.8 ± 1.2

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007854-RA
TC007854-RB

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007854	11 ± 1.1	5.2 ± 0.7	3.0 ± 0.2	1.6 ± 0.3

TC007854-RA	11 ± 1.1	5.2 ± 0.7	3.0 ± 0.2	1.6 ± 0.3
TC007854-RB	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0