BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007921

Symbol
LOC662437

Product
Condensin complex subunit 3-like Protein

NCBI Equivalent
662437

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	5.0 ± 0.2	0.2	2.8 ± 0.4	0.8
Brain	3.8 ± 0.1	0.2	4.0 ± 0.2	1.2
Anterior Midgut	2.6 ± 0.7	0.1	3.1 ± 0.2	0.9
Posterior Midgut	2.4 ± 0.7	0.1	3.6 ± 0.4	1.0
Hindgut	1.5 ± 0.2	0.1	1.4 ± 0.1	0.4
Tubules (Free)	2.8 ± 0.3	0.1	3.1 ± 0.6	0.9
Perirectal Tubules	2.0 ± 0.3	0.1
Rectum	2.7 ± 0.3	0.1
Rectal complex	1.6 ± 0.1	0.1	2.3 ± 0.2	0.7
Fat Body	16 ± 6.2	0.7	1.0 ± 0.5	0.3
Male Gonads	46 ± 4.6	2.0
Female Gonads	5.6 ± 1.1	0.2
Carcass	2.2 ± 0.6	0.1	1.8 ± 0.3	0.5

Whole Body	23 ± 2.7		3.4 ± 1.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007921-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007921	4.7 ± 0.8	5.2 ± 0.9	8.2 ± 0.6	4.7 ± 1.0

TC007921-RA	4.7 ± 0.8	5.2 ± 0.9	8.2 ± 0.6	4.7 ± 1.0