BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC007937
Symbol
 Usf
Product
 Upstream stimulatory factor 2-like Protein
NCBI Equivalent
663308
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head10 ± 1.20.813 ± 3.81.6
Brain6.8 ± 0.30.68.0 ± 1.51.0
Anterior Midgut7.5 ± 1.80.612 ± 2.61.4
Posterior Midgut7.2 ± 1.40.611 ± 1.51.4
Hindgut17 ± 2.51.418 ± 0.92.1
Tubules (Free)18 ± 3.01.515 ± 1.61.8
Perirectal Tubules31 ± 5.82.6  
Rectum19 ± 0.71.6  
Rectal complex18 ± 1.41.414 ± 2.11.7
Fat Body16 ± 1.71.320 ± 6.12.4
Male Gonads17 ± 1.61.4  
Female Gonads7.5 ± 0.80.6  
Carcass11 ± 3.40.99.4 ± 1.21.1
Whole Body12 ± 1.28.4 ± 1.5
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC007937-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00793714 ± 0.812 ± 1.011 ± 1.110 ± 2.4
TC007937-RA14 ± 0.812 ± 1.011 ± 1.110 ± 2.4
0–1 h1–24 h24–36 h36–72 h05101520FPKM