BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007940

Symbol
LOC663434

Product
L-2-hydroxyglutarate dehydrogenase, mitochondrial-like Protein

NCBI Equivalent
663434

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	15 ± 1.0	0.6	6.2 ± 1.2	0.3
Brain	19 ± 2.1	0.8	17 ± 2.2	0.8
Anterior Midgut	42 ± 9.4	1.8	29 ± 8.0	1.4
Posterior Midgut	31 ± 2.2	1.3	19 ± 2.8	0.9
Hindgut	25 ± 5.6	1.1	17 ± 0.5	0.8
Tubules (Free)	22 ± 1.1	0.9	24 ± 5.2	1.1
Perirectal Tubules	54 ± 21	2.2
Rectum	17 ± 2.3	0.7
Rectal complex	36 ± 3.0	1.5	51 ± 7.5	2.4
Fat Body	20 ± 1.1	0.9	57 ± 34	2.7
Male Gonads	22 ± 6.7	0.9
Female Gonads	1.4 ± 0.6	0.1
Carcass	13 ± 1.3	0.5	11 ± 3.3	0.5

Whole Body	24 ± 4.6		21 ± 12

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007940-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007940	0.7 ± 0.1	0.9 ± 0.0	2.3 ± 0.1	3.6 ± 0.3

TC007940-RA	0.7 ± 0.1	0.9 ± 0.0	2.3 ± 0.1	3.6 ± 0.3