BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007945

NCBI Equivalent
not available

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	7.0 ± 0.9	0.2	1.1 ± 1.0	0.0
Brain	0.1 ± 0.1	0.0	0.2 ± 0.2	0.0
Anterior Midgut	7.9 ± 0.4	0.2	6.2 ± 3.2	0.0
Posterior Midgut	11 ± 2.2	0.2	39 ± 41	0.2
Hindgut	15 ± 5.7	0.3	176 ± 56	0.9
Tubules (Free)	3685 ± 528	82	5370 ± 1433	29
Perirectal Tubules	210 ± 45	4.7
Rectum	11 ± 1.8	0.2
Rectal complex	159 ± 27	3.6	376 ± 75	2.0
Fat Body	1.2 ± 0.5	0.0	182 ± 105	1.0
Male Gonads	5.3 ± 5.2	0.1
Female Gonads	0.6 ± 0.1	0.0
Carcass	34 ± 7.1	0.8	8.7 ± 5.4	0.0

Whole Body	45 ± 6.2		188 ± 47

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007945-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007945	0.0 ± 0.0	0.1 ± 0.0	0.1 ± 0.1	0.0 ± 0.0

TC007945-RA	0.0 ± 0.0	0.1 ± 0.0	0.1 ± 0.1	0.0 ± 0.0