BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC007987

Symbol
Dim1

Product
thioredoxin-like 4A

NCBI Equivalent
664328

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	16 ± 1.3	1.0	23 ± 5.2	1.5
Brain	21 ± 0.2	1.3	25 ± 2.6	1.6
Anterior Midgut	19 ± 3.6	1.2	25 ± 5.5	1.6
Posterior Midgut	24 ± 6.8	1.5	22 ± 3.4	1.4
Hindgut	21 ± 4.2	1.3	16 ± 0.9	1.0
Tubules (Free)	14 ± 3.6	0.9	16 ± 1.4	1.0
Perirectal Tubules	10 ± 1.8	0.6
Rectum	7.0 ± 1.8	0.4
Rectal complex	16 ± 1.8	1.0	17 ± 0.2	1.1
Fat Body	12 ± 0.8	0.7	22 ± 6.6	1.4
Male Gonads	19 ± 2.9	1.2
Female Gonads	25 ± 3.3	1.6
Carcass	20 ± 2.8	1.2	20 ± 3.3	1.3

Whole Body	16 ± 0.9		15 ± 4.9

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC007987-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC007987	101 ± 15	130 ± 14	149 ± 29	134 ± 24

TC007987-RA	101 ± 15	130 ± 14	149 ± 29	134 ± 24