BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC008009

Symbol
Ork1

Product
Open rectifier potassium channel protein 1-like Protein

NCBI Equivalent
657720

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	1.1 ± 0.4	n.a.	0.4 ± 0.2	0.1
Brain	1.5 ± 0.1	n.a.	2.0 ± 0.3	0.6
Anterior Midgut	23 ± 3.3	12	14 ± 6.9	4.5
Posterior Midgut	5.5 ± 1.3	2.8	10 ± 5.1	3.3
Hindgut	43 ± 9.9	22	122 ± 28	39
Tubules (Free)	0.0 ± 0.0	n.a.	0.0 ± 0.0	0.0
Perirectal Tubules	7.8 ± 3.0	3.9
Rectum	14 ± 1.4	6.9
Rectal complex	12 ± 2.0	5.9	12 ± 1.9	3.9
Fat Body	0.6 ± 0.5	n.a.	0.1 ± 0.1	0.0
Male Gonads	0.0 ± 0.0	n.a.
Female Gonads	0.0 ± 0.0	n.a.
Carcass	0.3 ± 0.0	n.a.	0.5 ± 0.5	0.2

Whole Body	1.8 ± 0.1		3.1 ± 1.6

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC008009-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC008009	0.0 ± 0.0	0.0 ± 0.0	0.2 ± 0.0	0.1 ± 0.0

TC008009-RA	0.0 ± 0.0	0.0 ± 0.0	0.2 ± 0.0	0.1 ± 0.0