BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC008099

Symbol
ovo

iBeetle-Base
TC008099

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	3.4 ± 0.9	1.7	34 ± 10	4.1
Brain	0.0 ± 0.0	n.a.	0.1 ± 0.1	0.0
Anterior Midgut	0.0 ± 0.0	n.a.	0.2 ± 0.2	0.0
Posterior Midgut	0.0 ± 0.0	n.a.	0.1 ± 0.1	0.0
Hindgut	0.6 ± 0.1	n.a.	2.1 ± 0.2	0.3
Tubule	0.1 ± 0.0	n.a.	0.2 ± 0.2	0.0
Perirectal Tubules	2.8 ± 2.9	1.4
Rectal complex	6.2 ± 1.9	3.1	18 ± 4.1	2.2
Rectum	13 ± 0.7	6.5
Fat Body	0.2 ± 0.2	n.a.	0.1 ± 0.1	0.0
Male Gonads	0.0 ± 0.0	n.a.
Female Gonads	0.1 ± 0.1	n.a.
Carcass	0.5 ± 0.2	n.a.	1.9 ± 0.1	0.2

Whole Body	0.9 ± 0.1		8.1 ± 3.4

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC008099-RA
TC008099-RB
TC008099-RC
TC008099-RD

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC008099	0.1 ± 0.0	1.3 ± 0.3	1.9 ± 0.3	2.7 ± 0.9

TC008099-RA	0.0 ± 0.0	0.8 ± 0.2	0.4 ± 0.3	1.1 ± 0.4
TC008099-RB	0.1 ± 0.1	0.1 ± 0.2	0.6 ± 0.6	0.3 ± 0.3
TC008099-RC	0.0 ± 0.0	0.4 ± 0.2	0.8 ± 0.2	1.3 ± 0.6
TC008099-RD	0.0 ± 0.0	0.0 ± 0.0	0.2 ± 0.3	0.0 ± 0.0