BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC008217

Symbol
LOC664549

Product
Ubiquitin thioesterase otubain-like

iBeetle-Base
TC008217

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
No paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	8.4 ± 1.2	0.6	15 ± 3.2	1.2
Brain	40 ± 4.0	2.9	28 ± 5.1	2.2
Anterior Midgut	63 ± 17	4.5	37 ± 9.6	2.9
Posterior Midgut	73 ± 25	5.3	33 ± 7.1	2.6
Hindgut	56 ± 16	4.1	36 ± 20	2.9
Tubule	13 ± 1.3	1.0	12 ± 0.1	1.0
Perirectal Tubules	10 ± 2.0	0.7
Rectal complex	10.0 ± 0.3	0.7	11 ± 0.8	0.9
Rectum	12 ± 1.0	0.9
Fat Body	52 ± 5.3	3.7	39 ± 18	3.1
Male Gonads	117 ± 26	8.5
Female Gonads	84 ± 21	6.1
Carcass	18 ± 9.7	1.3	24 ± 5.1	1.9

Whole Body	14 ± 1.6		13 ± 2.1

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC008217-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC008217	54 ± 2.1	115 ± 13	160 ± 32	79 ± 11

TC008217-RA	54 ± 2.1	115 ± 13	160 ± 32	79 ± 11