BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC008291

Symbol
LOC662186

Product
Protein turtle-like Protein

NCBI Equivalent
662186

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	38 ± 7.7	5.8	16 ± 4.1	1.0
Brain	96 ± 3.0	15	69 ± 7.3	4.6
Anterior Midgut	0.6 ± 0.4	0.1	0.7 ± 0.1	0.0
Posterior Midgut	0.4 ± 0.2	0.1	0.5 ± 0.1	0.0
Hindgut	5.5 ± 6.5	0.9	1.1 ± 0.2	0.1
Tubules (Free)	10 ± 2.0	1.6	6.6 ± 1.9	0.4
Perirectal Tubules	7.9 ± 1.2	1.2
Rectum	5.5 ± 0.4	0.8
Rectal complex	6.6 ± 1.2	1.0	7.4 ± 1.9	0.5
Fat Body	8.6 ± 3.9	1.3	11 ± 4.5	0.7
Male Gonads	1.7 ± 0.6	0.3
Female Gonads	0.9 ± 0.5	0.1
Carcass	7.5 ± 5.8	1.2	8.5 ± 1.1	0.6

Whole Body	6.5 ± 0.7		15 ± 4.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC008291-RA
TC008291-RB
TC008291-RC
TC008291-RD
TC008291-RE

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC008291	0.4 ± 0.1	1.8 ± 0.4	3.2 ± 0.4	9.8 ± 6.9

TC008291-RA	0.1 ± 0.1	1.2 ± 0.5	2.6 ± 0.2	8.5 ± 7.1
TC008291-RB	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0
TC008291-RC	0.1 ± 0.0	0.1 ± 0.1	0.2 ± 0.1	0.5 ± 0.2
TC008291-RD	0.2 ± 0.0	0.5 ± 0.3	0.4 ± 0.3	0.7 ± 0.7
TC008291-RE	0.0 ± 0.0	0.0 ± 0.0	0.0 ± 0.0	0.1 ± 0.1