BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC008298

Symbol
LOC662573

Product
Outer dense fiber protein 3-like protein 2

NCBI Equivalent
662573

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	22 ± 0.8	5.2	196 ± 75	2.5
Brain	0.1 ± 0.0	0.0	0.7 ± 0.2	0.0
Anterior Midgut	0.0 ± 0.0	0.0	0.1 ± 0.1	0.0
Posterior Midgut	0.1 ± 0.1	0.0	0.5 ± 0.1	0.0
Hindgut	17 ± 2.7	4.0	34 ± 4.8	0.4
Tubules (Free)	0.1 ± 0.1	0.0	0.2 ± 0.1	0.0
Perirectal Tubules	11 ± 6.5	2.6
Rectum	41 ± 1.2	9.6
Rectal complex	23 ± 2.8	5.4	57 ± 4.9	0.7
Fat Body	1.6 ± 0.1	0.4	0.2 ± 0.3	0.0
Male Gonads	0.6 ± 0.2	0.2
Female Gonads	0.2 ± 0.1	0.0
Carcass	40 ± 14	9.6	185 ± 143	2.4

Whole Body	4.2 ± 0.2		77 ± 65

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC008298-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC008298	0.0 ± 0.0	0.1 ± 0.1	0.2 ± 0.1	1.2 ± 0.2

TC008298-RA	0.0 ± 0.0	0.1 ± 0.1	0.2 ± 0.1	1.2 ± 0.2