BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Mhc)
Gene Product (enter partial term like ‘eye’, ‘inositol’)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

Gene ID
TC008343

Symbol
scf

Product
Calumenin-like Protein

iBeetle-Base
TC008343

FlyAtlas 2
Fly homologue(s)

Tribolium Paralogues
Paralogues(s)

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	19 ± 0.8	0.7	41 ± 11	1.8
Brain	45 ± 0.6	1.7	31 ± 0.4	1.4
Anterior Midgut	9.9 ± 0.7	0.4	11 ± 0.9	0.5
Posterior Midgut	11 ± 1.2	0.4	12 ± 2.7	0.5
Hindgut	31 ± 2.5	1.1	39 ± 9.9	1.7
Tubule	18 ± 1.6	0.7	24 ± 2.0	1.1
Perirectal Tubules	26 ± 3.1	1.0
Rectal complex	26 ± 0.8	1.0	45 ± 10	2.0
Rectum	34 ± 2.8	1.3
Fat Body	73 ± 24	2.8	45 ± 11	2.0
Male Gonads	168 ± 52	6.3
Female Gonads	31 ± 4.2	1.2
Carcass	17 ± 3.8	0.6	26 ± 3.6	1.2

Whole Body	27 ± 2.6		22 ± 4.9

Rotate to see Transcript Table

View in UCSC Genome Browser

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rc	Rm	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC008343-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC008343	9.4 ± 0.9	18 ± 1.7	22 ± 1.0	29 ± 3.5

TC008343-RA	9.4 ± 0.9	18 ± 1.7	22 ± 1.0	29 ± 3.5