BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC008417
Symbol
 LOC659516
Product
 PDGF- and VEGF-related factor 3
NCBI Equivalent
659516
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head21 ± 1.43.318 ± 3.01.0
Brain98 ± 101565 ± 153.6
Anterior Midgut1.8 ± 1.10.31.4 ± 0.20.1
Posterior Midgut1.2 ± 0.50.20.9 ± 0.20.0
Hindgut38 ± 166.036 ± 152.0
Tubules (Free)3.1 ± 0.50.56.9 ± 0.70.4
Perirectal Tubules10 ± 1.11.6  
Rectum9.8 ± 1.21.5  
Rectal complex9.1 ± 0.21.427 ± 9.91.4
Fat Body71 ± 601132 ± 8.11.7
Male Gonads6.2 ± 1.31.0  
Female Gonads7.0 ± 0.21.1  
Carcass33 ± 3.95.243 ± 172.3
Whole Body6.4 ± 0.418 ± 7.6
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC008417-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0084174.0 ± 0.74.2 ± 0.48.6 ± 0.819 ± 4.3
TC008417-RA4.0 ± 0.74.2 ± 0.48.6 ± 0.819 ± 4.3
0–1 h1–24 h24–36 h36–72 h051015202530FPKM