BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC008542
Symbol
 Phf5a
Product
 Uncharacterized protein CG9548-like Protein
NCBI Equivalent
655398
Fly Homologues
 Fly homologues
Beetle Paralogues
 none identified
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head10 ± 0.10.616 ± 1.01.2
Brain35 ± 0.31.920 ± 2.51.6
Anterior Midgut38 ± 7.92.132 ± 6.72.5
Posterior Midgut41 ± 4.02.224 ± 4.71.9
Hindgut33 ± 7.01.819 ± 111.5
Tubules (Free)20 ± 2.21.112 ± 0.50.9
Perirectal Tubules13 ± 3.30.7  
Rectum10 ± 0.90.6  
Rectal complex15 ± 3.20.813 ± 0.61.0
Fat Body41 ± 6.22.325 ± 6.91.9
Male Gonads110 ± 136.0  
Female Gonads48 ± 2.82.6  
Carcass15 ± 3.60.816 ± 2.11.3
Whole Body18 ± 4.513 ± 1.9
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC008542-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC008542112 ± 13175 ± 20169 ± 8.6102 ± 14
TC008542-RA112 ± 13175 ± 20169 ± 8.6102 ± 14
0–1 h1–24 h24–36 h36–72 h050100150200FPKM