BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC008616
Symbol
 Cdk4
Product
 Cyclin-dependent kinase 1-like Protein
NCBI Equivalent
663975
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head7.8 ± 0.11.110 ± 0.61.2
Brain7.4 ± 0.31.013 ± 1.71.5
Anterior Midgut11 ± 1.11.58.9 ± 0.71.0
Posterior Midgut11 ± 0.41.58.7 ± 0.41.0
Hindgut17 ± 2.92.321 ± 4.52.4
Tubules (Free)7.0 ± 1.41.08.1 ± 0.50.9
Perirectal Tubules8.4 ± 0.21.1  
Rectum11 ± 0.51.5  
Rectal complex7.0 ± 0.31.011 ± 0.61.2
Fat Body15 ± 1.12.022 ± 0.52.5
Male Gonads13 ± 0.81.8  
Female Gonads34 ± 4.44.6  
Carcass15 ± 2.02.011 ± 3.01.3
Whole Body7.4 ± 0.88.7 ± 1.9
download
Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC008616-RA
download
Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC00861645 ± 0.666 ± 8.8108 ± 2057 ± 12
TC008616-RA45 ± 0.666 ± 8.8108 ± 2057 ± 12
0–1 h1–24 h24–36 h36–72 h050100150200FPKM