BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC008617

Symbol
Prosbeta7

Product
Proteasome subunit beta type-4-like Protein

NCBI Equivalent
663867

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	49 ± 3.3	0.8	156 ± 31	1.9
Brain	15 ± 1.8	0.3	33 ± 4.8	0.4
Anterior Midgut	146 ± 4.0	2.4	87 ± 4.6	1.1
Posterior Midgut	142 ± 29	2.4	74 ± 3.0	0.9
Hindgut	45 ± 7.5	0.7	58 ± 11	0.7
Tubules (Free)	89 ± 1.6	1.5	86 ± 5.7	1.1
Perirectal Tubules	41 ± 1.7	0.7
Rectum	41 ± 1.1	0.7
Rectal complex	59 ± 4.7	1.0	71 ± 5.3	0.9
Fat Body	75 ± 7.3	1.3	90 ± 21	1.1
Male Gonads	102 ± 16	1.7
Female Gonads	47 ± 5.3	0.8
Carcass	110 ± 32	1.8	93 ± 49	1.2

Whole Body	60 ± 5.9		80 ± 5.3

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC008617-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC008617	66 ± 0.7	112 ± 8.1	157 ± 37	91 ± 12

TC008617-RA	66 ± 0.7	112 ± 8.1	157 ± 37	91 ± 12