BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID (switches modes)

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC008629
Symbol
 hth
Product
 Homeobox protein homothorax-like Protein
NCBI Equivalent
641464
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head8.6 ± 1.21.219 ± 0.81.7
Brain8.7 ± 0.71.313 ± 1.41.1
Anterior Midgut1.6 ± 0.50.22.6 ± 0.50.2
Posterior Midgut10.0 ± 1.21.414 ± 0.91.2
Hindgut1.2 ± 1.10.21.1 ± 0.40.1
Tubules (Free)27 ± 2.43.832 ± 1.52.7
Perirectal Tubules44 ± 166.3  
Rectum1.5 ± 0.70.2  
Rectal complex18 ± 2.32.615 ± 0.31.3
Fat Body5.3 ± 1.10.83.3 ± 0.60.3
Male Gonads6.8 ± 1.11.0  
Female Gonads5.2 ± 0.50.8  
Carcass7.2 ± 0.81.017 ± 7.51.4
Whole Body6.9 ± 0.612 ± 2.0
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC008629-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0086299.6 ± 1.630 ± 2.855 ± 6.236 ± 8.8
TC008629-RA9.6 ± 1.630 ± 2.855 ± 6.236 ± 8.8
0–1 h1–24 h24–36 h36–72 h010203040506070FPKM