BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC008777

NCBI Equivalent
not available

Fly Homologues
none identified

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	0.2 ± 0.1	0.1	0.1 ± 0.1	0.0
Brain	0.0 ± 0.0	0.0	0.0 ± 0.0	0.0
Anterior Midgut	1.0 ± 0.7	0.3	0.3 ± 0.1	0.0
Posterior Midgut	36 ± 12	9.5	141 ± 65	7.7
Hindgut	1.1 ± 0.7	0.3	0.4 ± 0.3	0.0
Tubules (Free)	1.7 ± 0.5	0.4	87 ± 26	4.7
Perirectal Tubules	0.2 ± 0.1	0.1
Rectum	0.5 ± 0.2	0.1
Rectal complex	1.6 ± 1.5	0.4	0.5 ± 0.2	0.0
Fat Body	0.2 ± 0.1	0.0	0.2 ± 0.2	0.0
Male Gonads	0.3 ± 0.1	0.1
Female Gonads	0.1 ± 0.0	0.0
Carcass	1.5 ± 0.2	0.4	0.1 ± 0.1	0.0

Whole Body	3.8 ± 0.8		18 ± 18

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC008777-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC008777	0.0 ± 0.0	0.4 ± 0.0	0.2 ± 0.1	0.1 ± 0.0

TC008777-RA	0.0 ± 0.0	0.4 ± 0.0	0.2 ± 0.1	0.1 ± 0.0