BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC008801

Symbol
Dhc64C

Product
dynein heavy chain

NCBI Equivalent
664489

Fly Homologues
Fly homologues

Beetle Paralogues
Beetle Paralogues

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	9.2 ± 3.1	1.0	12 ± 0.1	1.4
Brain	1.0 ± 0.1	0.1	0.7 ± 0.1	0.1
Anterior Midgut	2.6 ± 0.6	0.3	1.9 ± 0.3	0.2
Posterior Midgut	2.4 ± 1.0	0.3	1.8 ± 0.3	0.2
Hindgut	0.7 ± 0.1	0.1	1.6 ± 0.7	0.2
Tubules (Free)	13 ± 0.4	1.4	20 ± 2.2	2.4
Perirectal Tubules	7.4 ± 0.7	0.8
Rectum	11 ± 1.1	1.2
Rectal complex	9.2 ± 1.5	1.0	13 ± 2.2	1.5
Fat Body	0.7 ± 0.0	0.1	0.9 ± 0.4	0.1
Male Gonads	0.7 ± 0.3	0.1
Female Gonads	0.7 ± 0.2	0.1
Carcass	1.0 ± 0.5	0.1	1.2 ± 0.3	0.1

Whole Body	9.3 ± 1.6		8.6 ± 1.8

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC008801-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC008801	1.5 ± 0.2	0.5 ± 0.1	0.7 ± 0.1	1.1 ± 0.7

TC008801-RA	1.5 ± 0.2	0.5 ± 0.1	0.7 ± 0.1	1.1 ± 0.7