BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

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Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009040

Symbol
LOC657817

Product
CCA tRNA nucleotidyltransferase 1, mitochondrial-like Protein

NCBI Equivalent
657817

Fly Homologues
Fly homologues

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	4.6 ± 0.1	0.2	6.5 ± 1.0	1.2
Brain	4.9 ± 0.0	0.2	6.4 ± 0.2	1.2
Anterior Midgut	13 ± 0.8	0.7	7.7 ± 1.4	1.4
Posterior Midgut	11 ± 1.2	0.6	7.6 ± 0.9	1.4
Hindgut	5.1 ± 0.4	0.3	7.5 ± 0.9	1.4
Tubules (Free)	9.4 ± 0.8	0.5	9.1 ± 0.5	1.7
Perirectal Tubules	10 ± 2.6	0.5
Rectum	7.3 ± 0.4	0.4
Rectal complex	6.8 ± 0.5	0.3	7.1 ± 0.5	1.3
Fat Body	21 ± 7.7	1.1	6.3 ± 0.6	1.1
Male Gonads	48 ± 7.1	2.4
Female Gonads	8.8 ± 1.0	0.4
Carcass	5.3 ± 0.8	0.3	4.7 ± 0.9	0.9

Whole Body	20 ± 3.2		5.5 ± 0.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009040-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009040	9.5 ± 0.9	4.6 ± 0.6	8.2 ± 0.3	7.0 ± 0.5

TC009040-RA	9.5 ± 0.9	4.6 ± 0.6	8.2 ± 0.3	7.0 ± 0.5