BeetleAtlas2 – Gene
For a particular Tribolium gene, find the pattern of expression in different tissues.
• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY
TC ID
TC009090
NCBI Equivalent
 not available
Fly Homologues
 Fly homologues
Beetle Paralogues
 Beetle Paralogues
SDs   Whole Body  
Adult & Larval Gene FPKMs and Enrichments
AdultLarval
TissueFPKMEnrichmentFPKMEnrichment
Head12 ± 0.52.330 ± 0.60.8
Brain5.0 ± 0.31.014 ± 1.50.4
Anterior Midgut1.6 ± 0.60.33.5 ± 0.70.1
Posterior Midgut2.0 ± 0.80.44.5 ± 0.30.1
Hindgut36 ± 8.37.258 ± 141.5
Tubules (Free)1.1 ± 0.30.28.6 ± 8.60.2
Perirectal Tubules7.1 ± 3.71.4  
Rectum12 ± 0.92.3  
Rectal complex11 ± 1.22.228 ± 7.00.8
Fat Body18 ± 6.83.693 ± 112.5
Male Gonads0.8 ± 0.40.2  
Female Gonads2.1 ± 0.20.4  
Carcass17 ± 4.63.577 ± 182.1
Whole Body5.0 ± 0.538 ± 3.0
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Rotate to see Transcript Table
View in UCSC Genome Browser to check results / gene predictionslinkout
Adult & Larval Transcript FPKMs
TranscriptAdultLarval
HdBrAgPgHgTuPtRmRcFbGmGfCsHdBrAgPgHgTuRcFbCs
TC009090-RA
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Embryo FPKMs
StageEmbryo0–1 h1–24 h24–36 h36–72 h
TC0090902.6 ± 0.35.7 ± 0.34.9 ± 1.03.7 ± 0.5
TC009090-RA2.6 ± 0.35.7 ± 0.34.9 ± 1.03.7 ± 0.5
0–1 h1–24 h24–36 h36–72 h0246810FPKM