BeetleAtlas: The Tribolium Gene Expression Atlas

For a particular Tribolium gene, find the pattern of expression in different tissues.

• Choose search type, start entering text, then select from the autosuggest menu •
Gene ID (e.g. TC006446)
Gene Symbol (e.g. Hcf)
Gene Product (enter partial term like ‘eye’, ‘inositol’)
NCBI ID — Switch to NCBI mode to work with NCBI IDs

or use a Drosophila ID to search for related Tribolium genes
FlyBase ID (e.g. FBgn0016075)
FlyBase CG number (e.g. CG16858)
FlyBase Symbol (e.g. vkg)

Gene:

ANATOMICAL KEY

TC ID
TC009144

Symbol
LOC663705

Product
THAP domain-containing protein 4-like Protein

NCBI Equivalent
663705

Fly Homologues
none identified

Beetle Paralogues
none identified

SDs Whole Body

Adult & Larval Gene FPKMs and Enrichments

	Adult		Larval
Tissue	FPKM	Enrichment	FPKM	Enrichment
Head	29 ± 3.3	1.1	15 ± 5.1	0.5
Brain	13 ± 0.2	0.5	14 ± 2.4	0.5
Anterior Midgut	14 ± 1.1	0.6	16 ± 2.2	0.5
Posterior Midgut	16 ± 1.6	0.6	17 ± 1.6	0.6
Hindgut	58 ± 19	2.3	34 ± 0.9	1.1
Tubules (Free)	37 ± 3.5	1.5	30 ± 3.4	1.0
Perirectal Tubules	59 ± 13	2.3
Rectum	43 ± 5.6	1.7
Rectal complex	48 ± 2.3	1.9	40 ± 7.9	1.3
Fat Body	37 ± 3.7	1.4	218 ± 84	7.4
Male Gonads	29 ± 4.5	1.1
Female Gonads	15 ± 2.7	0.6
Carcass	48 ± 6.0	1.9	44 ± 6.4	1.5

Whole Body	25 ± 5.2		30 ± 7.5

Rotate to see Transcript Table

View in UCSC Genome Browser to check results / gene predictions

Adult & Larval Transcript FPKMs

Transcript	Adult													Larval
	Hd	Br	Ag	Pg	Hg	Tu	Pt	Rm	Rc	Fb	Gm	Gf	Cs	Hd	Br	Ag	Pg	Hg	Tu	Rc	Fb	Cs
TC009144-RA

Embryo FPKMs

StageEmbryo	0–1 h	1–24 h	24–36 h	36–72 h
TC009144	82 ± 7.3	31 ± 1.0	34 ± 5.2	41 ± 5.7

TC009144-RA	82 ± 7.3	31 ± 1.0	34 ± 5.2	41 ± 5.7